Exam 24: Amino Acids and Proteins

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The amino acid threonine, (2S,3R)-2-amino-3-hydroxybutanoic acid,has two chiral centers.Draw a Fisher projection of threonine.

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Pipecolic acid logically would be substituted for which natural amino acid in the synthesis of peptide analogs? Pipecolic acid logically would be substituted for which natural amino acid in the synthesis of peptide analogs?

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The study of all proteins that are expressed in a cell at a given time is called ___________.

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All reactions that occur in living cells are mediated by biological catalysts called ___________.The prevailing hypothesis for enzyme catalysis is called the ____________ hypothesis.

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For the accompanying fully-protonated amino acid,what is the arrangement of pKa values in order of increasing magnitude? For the accompanying fully-protonated amino acid,what is the arrangement of pK<sub>a</sub> values in order of increasing magnitude?

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Peptide synthesis has four basic steps.These are:

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Draw the structure of the following tripeptide (starting with the N-terminal residue and ending with the C-terminal residue),showing stereochemical details: Val-Trp-Asn

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When the pentapeptide below is heated first with 2,4-dinitrofluorobenzene (and base)and then subjected to acidic hydrolysis,which amino acid will bear the dinitrophenyl group? Leu·Val·Gly·Phe·Ile

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The Henderson-Hasselbach equation shows that the ________________ of an acid is the ________________ at which the acid is half-neutralized.

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Using the three-letter code names for amino acids,write the structures of all possible peptides containing these amino acids: Val,Ser,Leu

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Complete the following equations: Complete the following equations:

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Which of these natural amino acids contains an imidazole ring?

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The most widely used method for identifying the N-terminal amino acid in a peptide chain is called the ____________.

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Which of these amino acids cannot be described as an L amino acid? Which of these amino acids cannot be described as an L amino acid?

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Show the structures of the products obtained on reaction of valine with ninhydrin.

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Which one of these amino acids does not give the usual purple color with ninhydrin?

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Beginning with a three-carbon alcohol,outline all necessary steps in the preparation of D,L-alanine.

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Which of these natural amino acids contains a pyrrolidine ring?

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Predict the direction of migration (toward anode or cathode)of alanine during electrophoresis at pH = 5.

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The secondary structure of proteins is derived from:

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